| SARS-COV2 interacting Protein |
Complex list |
| AATF | AATF-NGDN-NOL10 complex |
| ADAM9 | ITGAV-ITGB5-ADAM9 complex | ITGA9-ITGB1-ADAM9 complex |
| AKAP8L | CHUK-IQGAP2-AKAP8L-RELA-TNIP2 complex |
| AKAP9 | KCNQ1 macromolecular complex |
| AP2M1 | Stargazin-Glu1-mu2 complex | Stargazin-Glu2A-mu2 complex |
| AP3B1 | AP3 adaptor complex | AP3-BLOC1 complex | PI4K2A-WASH complex |
| ATP1B1 | MLC1-Na,K-ATPase-Kir4.1-AQP4-TRPV4-syntrophin complex | HEPACAM-MLC1-Na,K-ATPase-Kir4.1-AQP4-TRPV4 complex |
| ATP5MG | F1F0-ATP synthase, mitochondrial | Frataxin complex |
| ATP6V1A | v-ATPase-Ragulator-AXIN/LKB1-AMPK complex |
| BAG5 | HSP70-BAG5-PARK2 complex |
| BRD4 | BRD4-RFC complex | BRD4 complex | P-TEFb-BRD4-TRAP220 complex | BRD4-P-TEFb complex | BRD4-P-TEFb complex |
| CHMP2A | ESCRT-III complex |
| COLGALT1 | ADIPOQ-PLOD3-GLT25D1 complex |
| CSDE1 | Multiprotein complex (mRNA turnover) |
| CSNK2A2 | FACT complex, UV-activated | Casein kinase II-HMG1 complex | Casein kinase II (beta-dimer, alpha, alpha') | Casein kinase II (beta-dimer, alpha'-dimer) | Casein kinase II (beta-dimer, alpha, alpha') |
| CSNK2B | FACT complex, UV-activated | Casein kinase II-HMG1 complex | Casein kinase II (beta-dimer, alpha, alpha') | Casein kinase II (beta-dimer, alpha'-dimer) | Casein kinase II (beta-dimer, alpha, alpha') | Casein kinase II (beta-dimer, alpha-dimer) |
| CUL2 | Ubiquitin E3 ligase (VHL, TCEB1, TCEB2, CUL2, RBX1) | CAND1-CUL2-RBX1 complex | Ubiquitin E3 ligase (VHL, TCEB1, TCEB2, CUL2) | Ubiquitin E3 ligase (CSN1, CSN8, HRT1, SKP1, SKP2, CUL1, CUL2, CUL3) | CCDC22-COMMD1-CUL2 complex | PRAME-Cullin2 ubiquitin ligase complex | PRAME complex |
| CWC27 | C complex spliceosome |
| DDX21 | Toposome | Nop56p-associated pre-rRNA complex | B-WICH complex | B-WICH complex |
| DNAJC11 | MIB complex |
| DNMT1 | DNMT1-EHMT2-PCNA complex | DNMT1-EHMT2 complex | DNMT1-RB1-HDAC1-E2F1 complex | DAXX-DNMT1-DMAP1 complex | RGS6-DNMT1-DMAP1 complex | RBL2 complex (DNMT1, E2F4, E2F5, HDAC1, SUV39H1, RBL2) | TIP5-DNMT-HDAC1 complex | CTNNB1-DNMT1 complex | ZNF304-corepressor complex |
| ECSIT | Ecsit complex (ECSIT, MT-CO2, GAPDH, TRAF6, NDUFAF1) | Ecsit complex (ECSIT, NDUFS3, TOM20) | Ecsit complex (ECSIT, MT-CO2, NDUFA1, MT-ND1, TRAF6, NDUFAF1) | Ecsit complex (ECSIT, NDUFS3, NDUFAF1) |
| ELOB | Ubiquitin E3 ligase (VHL, TCEB1, TCEB2, CUL2, RBX1) | Ubiquitin E3 ligase (ASB2, TCEB1, TCEB2, CUL5, RNF7) | Ubiquitin E3 ligase (ASB1, TCEB1, TCEB2, CUL5, RNF7) | Ubiquitin E3 ligase (ASB6, TCEB1, TCEB2, CUL5, RNF7) | Ubiquitin E3 ligase (ASB7, TCEB1, TCEB2, CUL5, RNF7) | Ubiquitin E3 ligase (ASB12, TCEB1, TCEB2, CUL5, RNF7) | Ubiquitin E3 ligase (WSB1, TCEB1, TCEB2, CUL5, RBX1) | Ubiquitin E3 ligase (VHL, TCEB1, TCEB2, CUL2) | VHL-VDU1-TCEB1-TCEB2 complex | VHL-TCEB1-TCEB2 complex | Cullin-RING E3 ubiquitin ligase complex | HIF1alpha-VHL-ElonginB-ElonginC complex | PRAME-ElonginBC ubiquitin ligase | PRAME complex | VHL-ElonginB-ElonginC complex |
| ERC1 | CHUK-ERC1-IKBKB-IKBKG |
| EXOSC2 | Exosome | Exosome | mRNA decay complex (UPF1, UPF2, UPF3B, DCP2, XRN1, XRN2, EXOSC2, EXOSC4, EXOSC10, PARN) | Exosome |
| EXOSC5 | Exosome | Exosome | Exosome |
| EXOSC8 | Exosome | Exosome | Exosome |
| FAM8A1 | HRD1 complex |
| FBLN5 | ELN-FBLN5-FBN1 complex |
| FBN1 | ELN-FBLN2-FBN1 complex | ELN-FBLN5-FBN1 complex |
| FKBP15 | PI4K2A-WASH complex |
| G3BP2 | TRIM25-G3BP2 complex |
| GNB1 | GPR56-CD81-Galpha(q/11)-Gbeta complex | GNAS-GNB1-GNG2 complex | G protein complex (MCF2, GNB1, GNG2) | G protein complex (BTK, GNG1, GNG2) | G protein complex (CACNA1A, GNB1, GNG2) | G protein complex (PTHR1, GNB1, GNG2) | G protein complex (HDAC5, GNB1, GNG2) | G protein complex (HDAC4, GNB1, GNG2) | KCTD12-GNB1-GNG2 complex | KCTD8-GNB1-GNG2 complex | KCTD16-GNB1-GNG2 complex | IGF1R-CXCR4-GNAI2-GNB1 complex | GNAI1-GNGT1-GNB1 complex | GNAI1-GNB1-GNG2 complex | GNAI1-GNB1-GNG3 complex | GNAI1-GNB1-GNG4 complex | GNAI1-GNB1-GNG5 complex | GNAI1-GNB1-GNG7 complex | GNAI1-GNB1-GNG8 complex | GNAI1-GNB1-GNG10 complex | GNAI1-GNB1-GNG11 complex | GNAI1-GNB1-GNG12 complex | GNAI1-GNB1-GNG13 complex | GNAS-L-GNB1-GNG1 complex | GNAS-L-GNB1-GNG2 complex | GNAS-L-GNB1-GNG3 complex | GNAS-L-GNB1-GNG4 complex | GNAS-L-GNB1-GNG5 complex | GNAS-L-GNB1-GNG7 complex | GNAS-L-GNB1-GNG8 complex | GNAS-L-GNB1-GNG10 complex | GNAS-L-GNB1-GNG11 complex | GNAS-L-GNB1-GNG12 complex | GNAS-L-GNB1-GNG13 complex |
| GNG5 | GNAI1-GNB1-GNG5 complex | GNAI1-GNB2-GNG5 complex | GNAI1-GNB3-GNG5 complex | GNAI1-GNB4-GNG5 complex | GNAI1-GNB5-GNG5 complex | GNAS-L-GNB1-GNG5 complex | GNAS-L-GNB2-GNG5 complex | GNAS-L-GNB3-GNG5 complex | GNAS-L-GNB4-GNG5 complex | GNAS-L-GNB5-GNG5 complex |
| GOLGA2 | GM130-GRASP65 complex |
| GORASP1 | GM130-GRASP65 complex |
| GPAA1 | GAA1-GPI8-PIGT-PIG-PIGS complex |
| GRIPAP1 | GRASP1-GRIP1 complex |
| GRPEL1 | HSPA9-GRPEL1-GRPEL2 complex | GRPEL1-GRPEL2 complex | HSPA9-GRPEL1 complex | HSPA9-GRPEL1-GRPEL2-TIMM44 complex |
| GTF2F2 | RNA polymerase II holoenzyme complex | TFIIF complex (transcription factor IIF) | RNA polymerase II (RNAPII) | BRCA1-RNA polymerase II complex |
| HDAC2 | SIN3 complex | Mi2/NuRD complex | MeCP1 complex | SNF2h-cohesin-NuRD complex | Sin3 complex | NuRD.1 complex | SAP complex (Sin3-associated protein complex) | SAP complex (Sin3-associated protein complex) | SIN3-HDAC-SAP30-ARID4 complex | NRD complex (Nucleosome remodeling and deacetylation complex) | CoREST-HDAC complex | Anti-HDAC2 complex | anti-BHC110 complex | XFIM complex | BHC complex | CtBP complex | CtBP core complex | HDAC2-asscociated core complex | MeCP1 complex | MeCP1 complex | SIN3-SAP25 complex | SIN3-HDAC-SAP30-ARID4 complex | BRMS1-SIN3-HDAC complex | SIN3-HDAC-SAP30-ARID4 complex | BRG1-SIN3A complex | BRM-SIN3A complex | SIN3 complex | SIN3-ING1b complex I | SIN3-ING1b complex II | SIN3-SAP25 complex | NCOR-SIN3-RPD3 complex | MeCP2-SIN3A-HDAC complex | LARC complex (LCR-associated remodeling complex) | BRG1-SIN3A-HDAC containing SWI/SNF remodeling complex I | BRM-SIN3A-HDAC complex | BRAF53-BRCA2 complex | MTA1 complex | MTA2 complex | MTA1-HDAC core complex | ATR-HDAC2 complex | ATR-HDAC2-CHD4 complex | CoREST-HDAC2 complex | ALL-1 supercomplex | SNF2h-HDAC12 complex | BHC110 complex | NCOR2 complex | ESR1-CDK7-CCNH-MNAT1-MTA1-HDAC2 complex | HCF-1 complex | BRCA1-HDAC1-HDAC2 complex | ING2 complex | mSin3A complex | mSin3A-HDAC1-HDAC2 complex | MAD1-mSin3A-HDAC2 complex | NCOR-SIN3-HDAC-HESX1 complex | AJUBA-GFI1-HDAC2 complex | MiDAC complex | DNTTIP1-ZNF541-HDAC1-HDAC2 complex | TBX20-HDAC2 repressor complex | CDH4-HDAC2-MTA2-RBBP7-TWIST1 complex |
| HOOK1 | FHF complex | Hook1-Vps16 complex | Hook1-Vps18 complex | Hook1-Vps39 complex | Hook1-Vps41 complex | HOOK1-SHP2 complex |
| INTS4 | Integrator complex | DSS1 complex | Integrator-RNAPII complex |
| ITGB1 | ITGA5-ITGB1-FN1-TGM2 complex | ITGA5-ITGB1-ADAM15 complex | ITGA5-ITGB4 complex | CD98-LAT2-ITGB1 complex | ITGA7-ITGB1-CD151 complex | ITGA7-ITGB1-CD9 complex | ITGA7-ITGB1-ITGB1BP3 complex | ITGA3-ITGB1-BSG complex | ITGA3-ITGB1-CD63 complex | ITGA3-ITGB1-CD151 complex | ITGA3-ITGB1-THBS1 complex | ITGA3-ITGB1 complex | ITGA6-ITGB1-CD151 complex | ITGA6-ITGB1 complex | ITGB1-RAP1A-PKD1 complex | ITGA4-ITGB1-EMILIN1 complex | ITGA4-ITGB1 complex | ITGA4-ITGB1-CD81 complex | ITGA4-ITGB1-CD53 complex | ITGA4-ITGB1-VCAM1 complex | ITGA4-ITGB1-JAM2 complex | ITGA4-ITGB1-CD47 complex | ITGA4-ITGB1-CD63 complex | ITGA4-ITGB1-THBS1 complex | ITGA4-ITGB1-THBS2 complex | ITGA2-ITGB1-CD47 complex | ITGA2-ITGB1-CHAD complex | ITGA2-ITGB1-COL6A3 complex | ITGA2-ITGB1 complex | ITGA1-ITGB1-COL6A3 complex | ITGA1-ITGB1-PTPN2 complex | ITGAV-ITGB1 complex | ITGA6-ITGB1-CYR61 complex | ITGA8-ITGB1 complex | ITGA9-ITGB1-ADAM9 complex | ITGA9-ITGB1-VCAM1 complex | ITGA9-ITGB1-TNC complex | ITGB1-ITGA9 complex | ITGA9-ITGB1-ADAM15 complex | ITGA9-ITGB1-FIGF complex | ITGA9-ITGB1-ADAM12 complex | ITGA5-ITGB1-FN-1-NOV complex | ITGA5-ITGB1-CAL4A3 complex | ITGAV-ITGB1-SPP1 complex | ITGA9-ITGB1-VEGFC complex | ITGA9-ITGB1-VEGFA complex | ITGA9-ITGB1-ADAM8 complex | LAT2-ITGB1 complex | ITGA10-ITGB1 complex | ITGA11-ITGB1 complex | ITGA11-ITGB1-COL1A1 complex | ITGB1-NRP1 complex | ITGA9-ITGB1-SPP1 complex | ITGA5-ITGB1-SPP1 complex | NG2-galectin-3-alpha3beta1-integrin complex | ITGB1-RACK1 complex |
| LARP1 | LARP1-PABPC1-RYDEN complex |
| LARP7 | 7SK RNP complex |
| MARK2 | Kinase maturation complex 1 |
| MAT2B | Methionine adenosyltransferase alpha2 beta-v1 | Methionine adenosyltransferase alpha1 beta-v1 |
| MFGE8 | IL-15-lactadherin complex |
| MOV10 | Spliceosome | TRBP containing complex (DICER, TRBP, AGO2, RPL7A, EIF6, MOV10) | TRBP containing complex (DICER, RPL7A, EIF6, MOV10 and subunits of the 60S ribosomal particle) |
| MPHOSPH10 | IMP3-IMP4-MPP10 complex |
| MRPS2 | 28S ribosomal subunit, mitochondrial | 55S ribosome, mitochondrial |
| MRPS25 | 28S ribosomal subunit, mitochondrial | 55S ribosome, mitochondrial |
| MRPS27 | 28S ribosomal subunit, mitochondrial | 55S ribosome, mitochondrial |
| MRPS5 | 28S ribosomal subunit, mitochondrial | 55S ribosome, mitochondrial |
| NDUFAF1 | Respiratory chain complex I (early intermediate NDUFAF1 assembly), mitochondrial | Respiratory chain complex I (incomplete intermediate ND1, ND2, ND3, CIA30 assembly), mitochondrial | Ecsit complex (ECSIT, MT-CO2, GAPDH, TRAF6, NDUFAF1) | Ecsit complex (ECSIT, MT-CO2, NDUFA1, MT-ND1, TRAF6, NDUFAF1) | Ecsit complex (ECSIT, NDUFS3, NDUFAF1) | Respiratory chain complex I (incomplete NDUFAF1 assembly), mitochondrial |
| NDUFB9 | Respiratory chain complex I (holoenzyme), mitochondrial | Respiratory chain complex I (beta subunit) mitochondrial |
| NEK9 | FACT-NEK9 complex |
| NGDN | AATF-NGDN-NOL10 complex |
| NOL10 | AATF-NGDN-NOL10 complex |
| NUP98 | Nup 107-160 subcomplex | NPC subcomplex (NUP98, NUP107, NUP133, NUP160) |
| OS9 | HIF1A-OS9-EGLN1 complex | HIF1A-OS9-EGLN3 complex | HRD1 complex | AUP1-OS9-SEL1L-UBC6e-UBXD8 complex |
| PABPC1 | Spliceosome | C complex spliceosome | H2AX complex, isolated from cells without IR exposure | Multiprotein complex (mRNA turnover) | PABPC1-HSPA8-HNRPD-EIF4G1 complex | LARP1-PABPC1-RYDEN complex |
| PCNT | Pericentrin-GCP complex |
| PIGS | GAA1-GPI8-PIGT-PIG-PIGS complex |
| PLOD2 | PLOD2-FKBP10 complex |
| POLA1 | RC complex (Replication competent complex) | RC complex during S-phase of cell cycle | RC complex during G2/M-phase of cell cycle | DNA synthesome complex (13 subunits) | DNA synthesome complex (17 subunits) | DNA polymerase alpha-primase complex | DNA synthesome core complex | DNA synthesome complex (15 subunits) | DNA synthesome complex (17 subunits) |
| POLA2 | RC complex (Replication competent complex) | DNA synthesome complex (13 subunits) | DNA synthesome complex (17 subunits) | DNA polymerase alpha-primase complex | DNA synthesome core complex | DNA synthesome complex (15 subunits) | DNA synthesome complex (17 subunits) |
| PPIL3 | Spliceosome | C complex spliceosome |
| PRIM1 | DNA synthesome complex (13 subunits) | DNA synthesome complex (17 subunits) | DNA polymerase alpha-primase complex | DNA synthesome core complex | DNA synthesome complex (15 subunits) | DNA synthesome complex (17 subunits) |
| PRKACA | AKAP250-PKA-PDE4D complex | KCNQ1 macromolecular complex |
| PRKAR2A | AKAP5-PRKAR2A-PPP3CA complex | KCNQ1 macromolecular complex | PKA (RII-alpha and RII-beta)-AKAP5-ADRB1 complex | beta(1)-AR receptosome (ADRB1-SAP97-AKAP79-PRKAR2A) | GSKIP-GSK3B-PRKAR2A complex | GSKIP-GSK3B-PRKAR2A complex | PRKAR2A-GSKIP-GSK3B-DNM1L complex |
| PRKAR2B | AMY-1-S-AKAP84-RII-beta complex | PKA (RII-alpha and RII-beta)-AKAP5-ADRB1 complex | GSKIP-PRKAR2B complex |
| PTBP2 | DCS complex (PTBP1, PTBP2, HNRPH1, HNRPF) | DCS complex |
| RAB8A | HD-RAB8A-OPTN complex | BIN1-EHBP1-RAB8A complex | HOOK2-PCM1-RAB8A complex |
| RBM28 | Nop56p-associated pre-rRNA complex |
| RBX1 | Ubiquitin E3 ligase (SKP1A, SKP2, CUL1, RBX1) | Ubiquitin E3 ligase (SKP1A, FBXW8, CUL7, RBX1) | Ubiquitin E3 ligase (VHL, TCEB1, TCEB2, CUL2, RBX1) | Ubiquitin E3 ligase (WSB1, TCEB1, TCEB2, CUL5, RBX1) | CAND1-CUL1-RBX1 complex | CAND1-CUL2-RBX1 complex | CAND1-CUL3-RBX1 complex | CAND1-CUL4A-RBX1 complex | CAND1-CUL4B-RBX1 complex | Ubiquitin E3 ligase (DDB1, CUL4A, RBX1) | DDB2 complex | CSA complex | CSA-POLIIa complex | Ubiquitin E3 ligase (FBXO31, SKP1A, CUL1, RBX1) | Ubiquitin E3 ligase (SKP1A, SKP2, CUL1, RBX1) | Ubiquitin E3 ligase (FBXW11, SKP1A, CUL1, RBX1) | Ubiquitin E3 ligase (DDB1, DDB2, CUL4A, CUL4B, RBX1) | Ubiquitin E3 ligase (AHR, ARNT, DDB1, TBL3, CUL4B, RBX1) | Ubiquitin E3 ligase (DET1, DDB1, CUL4A, RBX1, COP1) | Ubiquitin E3 ligase (FBXW7, CUL1, SKP1A, RBX1) | Ubiquitin E3 ligase (FBXW7, CUL1, SKP1A, RBX1) | Ubiquitin E3 ligase (GLMN, FBXW8, SKP1A, RBX1) | Neddylin ligase (FBXO11, SKP1, CUL1, RBX1) | Ubiquitin E3 ligase (CDC34, CUL1, RBX1) | Ubiquitin E3 ligase (CDT1, DDB1, CUL4A, RBX1) | Ubiquitin E3 ligase (CDC34, NEDD8, BTRC, CUL1, SKP1A, RBX1) | Ubiquitin E3 ligase (SMAD3, BTRC, CUL1, SKP1A, RBX1) | Ubiquitin E3 ligase (FBXO18, SKP1A, CUL1, RBX1) | Ubiquitin E3 ligase (NIPA, SKP1A, CUL1, RBX1) | Ubiquitin E3 ligase (CSN1, CSN8, HRT1, SKP1, SKP2, CUL1, CUL2, CUL3) | Ubiquitin E3 ligase (DDB1, CUL4A, RBX1) | Ubiquitin E3 ligase (BTRC, CUL1, RBX1, SKP1) | p27-cyclinE-Cdk2 - Ubiquitin E3 ligase (SKP1A, SKP2, CUL1, CKS1B, RBX1) complex | Ubiquitin E3 ligase (SKP1A, SKP2, CUL1, CKS1B, RBX1) | Ubiquitin E3 ligase (CUL1, RBX1, SKP1) | 3M complex | Ubiquitin E3 ligase (FBXO18, SKP1A, CUL1, RBX1) | CRBN-DDB1-CUL4A-RBX1 E3 ubiquitin ligase | Ubiquitin E3 ligase (CUL1, FBXO6, RBX1, SKP1) | Ubiquitin E3 ligase (CUL1, FBXO17, RBX1, SKP1) | Ubiquitin E3 ligase (CUL1, FBXO27, RBX1, SKP1) | Ubiquitin E3 ligase (CUL1, FBXO44, RBX1, SKP1) | HINT1-UBC3-RBX1 complex | Ubiquitin E3 ligase (CUL3, KEAP1, RBX1) | Ubiquitin E3 ligase (CUL3, KLHL7, RBX1) | Ubiquitin E3 ligase (CUL3, KLHL9, KLHL13, RBX1) | Ubiquitin E3 ligase (CUL3, KLHL20, RBX1) | Ubiquitin E3 ligase (CUL3, KLHL24, RBX1) | PRAME complex |
| REEP5 | REEP5-SPG33 complex |
| RHOA | RHOA-IP3R-TRPC1 complex | MRIP-MBS-RHOA complex | MRIP-RHOA complex | GNAQ-GEFT-RHOA complex | RAC1-RHOA-VANGL2 complex |
| RIPK1 | TNF-R1-associated signaling complex | TNF-R1 signaling complex | RIPK1-FADD-caspase-8 complex |
| RPL36 | Ribosome, cytoplasmic | 60S ribosomal subunit, cytoplasmic | Nop56p-associated pre-rRNA complex | TRBP containing complex (DICER, RPL7A, EIF6, MOV10 and subunits of the 60S ribosomal particle) |
| RTN4 | Nogo-potassium channel complex |
| SEPSECS | SEPHS1-SEPHS2-SEPSECS-SECp43 complex |
| SLC9A3R1 | C-CFTR-NHERF-ezrin complex | CFTR-NHERF-beta(2)AR signaling complex | CXCR2-NHERF1-PLC-beta-3 complex | SLC9A3R1-ACTN4 complex | PTEN-NHERF1-EGFR complex | NHERF1-PRKCZ complex | NHERF1-NPT2A-EZR complex | PDZK1-NHERF1-EZR complex |
| SLU7 | Spliceosome | C complex spliceosome |
| TBK1 | Kinase maturation complex 2 | TNF-alpha/NF-kappa B signaling complex 10 | TMEM173-TBK1 complex |
| TBKBP1 | Kinase maturation complex 2 |
| TCF12 | PTF1-bHLH complex |
| TIMM10 | TIM (TIM9, TIM10) complex, mitochondrial |
| TIMM9 | TIM (TIM9, TIM10) complex, mitochondrial |
| TLE1 | TLE1 corepressor complex (MASH1 promoter-corepressor complex) | OCT1-OBF1-DNA-TLE1 complex | TLE1-TLE2 complex | TLE1 homodimer complex | TLE-Histone H3 complex | TLE1 corepressor complex (MASH1 promoter-corepressor complex) | NK-3-Groucho-HIPK2-SIN3A-RbpA48-HDAC1 complex | NK-3-Groucho complex | HESX1-TLE1 complex | CUL4B-DDB1-TLE1 complex | TBX20-TLE1 repressor complex |
| TLE3 | CUL4B-DDB1-TLE3 complex | TBX20-TLE3 repressor complex |
| TOR1A | TorsinA-TorsinB complex | LAP1-TOR1A complex |
| TOR1AIP1 | LAP1-TOR1A complex |
| TUBGCP2 | Pericentrin-GCP complex | Gamma-tubulin complex |
| TUBGCP3 | Pericentrin-GCP complex | Gamma-tubulin complex |
| UBAP2L | CPSF6-ITCH-NUDT21-POLR2A-UBAP2L complex | CPSF6-EWSR1-ITCH-NUDT21-POLR2A-UBAP2L complex | ATAC complex, YEATS2-linked |
| UPF1 | SMG-1-UPF-ERF1-ERF3 complex (SURF) | Upf complex (UPF1, UPF2, UPF3a) | Upf complex (UPF1, UPF2, UPF3b) | Postsplicing complex | mRNA decay complex (UPF1, UPF2, UPF3B, DCP2, XRN1, XRN2, EXOSC2, EXOSC4, EXOSC10, PARN) | DCP1A-NR3C1-PNRC2-UPF1-complex |
| VPS11 | Class C Vps complex (VPS11, VPS18, STX7) | Class C Vps complex (VPS11, VPS18, VPS16) | Class C VPS/HOPS complex | CORVET complex | HOPS complex |
| VPS39 | Class C VPS/HOPS complex | Hook1-Vps39 complex | HOPS complex |
| WASHC4 | WASH complex | WASH-CAPZalpa/beta complex | PI4K2A-WASH complex |