| Complex |
Protein membership in complex |
No. of proteins interacting with SARS-COV2 |
No. of interacting SARS-COV2 proteins |
| 0.1 Nop56p-associated pre-rRNA complex | DHX30 KRI1 C8orf33 NSA2 DDX24 KNOP1 MYBBP1A RPL26 LARP1 EBNA1BP2 DDX18 TENT4B RPL13A ZNF512 RPS5 LARP1B MRTO4 RPL26L1 RPS15 PES1 NOP16 FTSJ3 RPS13 FYTTD1 UPF1 NOP56 RRP9 MOV10 ZCCHC3 PWP1 DKC1 RSBN1L NMNAT1 CCDC137 DDX50 STAU2 GLYR1 RRP1B POP1 ZNF770 RPS24 MYEF2 NOC3L RPL15 DDX55 RPL17 TTF1 GNL2 DDX21 NIFK C7orf50 NOC2L DDX31 AVEN RRP15 GPATCH4 ZC3HAV1 PUM3 RBM28 NSD2 ZNF768 NIP7 LLPH RPF2 GTPBP4 LYAR STAU1 EEF1A1 PPAN-P2RY11 SURF6 NOL12 DDX56 RBM34 HP1BP3 DDX27 RRS1 RSL1D1 RBMX2 NOP2 PAK1IP1 GNL3 PABPC4 UTP14A WDR12 ESF1 BRIX1 REXO4 RSL24D1 ZC3H8 ZNF22 RRP8 | 8 | 2 |
| 0.1 Nop56p-associated pre-rRNA complex match 2 | MPHOSPH10 DHX30 DDX24 UTP23 YTHDC2 RPL15 RPL17 GNL2 IMP4 DDX21 PES1 HP1BP3 DDX27 RIOX1 FTSJ3 RSL1D1 MYBBP1A NOC2L KRR1 RPL26 RPL36A LARP1 DDX18 RRP12 NOP56 NOP2 RPL13A GNL3 RBM28 SRP68 DHX57 NMNAT1 SRP72 PRDM15 URB2 HERC5 GTPBP4 CCDC137 FARS2 BRIX1 IGF2BP3 GLYR1 LYAR ZCCHC9 POP1 RPS24 | 5 | 2 |
| 0.2 KCNQ1 macromolecular complex | PRKACA CDK5RAP2 AKAP3 AKAP5 AKAP9 GPR161 PRKAR1A PRKAR2A PRKACB PRKAR1B AKAP11 CEP68 | 5 | 1 |
| 0.8 28S ribosomal subunit, mitochondrial | MRPS9 MRPS16 MRPS18C MRPS33 MRPS14 MRPS27 MRPS35 MRPS25 MRPS28 MRPS7 MRPS26 MRPS31 MRPS24 MRPS17 MRPS5 DAP3 MRPS23 MRPS6 MRPS22 MRPS15 MRPS10 MRPS21 MRPS2 MRPS34 PTCD3 MRPS18B | 4 | 1 |
| 0.05 ITGA5-ITGB1-CAL4A3 complex | MAN2A1 SIAE CERCAM TAZ NAGLU MEGF8 PCSK6 ARSK UGGT2 CHPF2 TXNDC16 SGSH GUSB FUT11 MAN2B1 GALNS ARSA COL18A1 FOXRED2 | 4 | 1 |
| 0.6 Exosome | ARPC1A FARSB EXOSC7 C1D EXOSC2 DIS3 EXOSC5 EXOSC6 EXOSC8 EXOSC10 MPHOSPH6 FAM98B DIS3L ARPC3 EXOSC4 EXOSC1 EXOSC3 EXOSC9 ARPC5 | 4 | 1 |
| 0.8 DNA polymerase alpha-primase complex | POLA2 POLA1 PRIM1 PRIM2 KDM3B | 4 | 1 |
| 0.1 CTFC-TAF1 complex | CTCF GNL2 KNOP1 DDX21 HP1BP3 RRS1 RSL1D1 DDX31 RRP12 ZC3HAV1 RRP9 NIP7 NOP53 DDX50 TOE1 POP1 PHAX ZNF22 LARP7 | 3 | 2 |
| 0.1 IMP3-IMP4-MPP10 complex | RPL26L1 NGDN DHX30 MPHOSPH10 NSA2 RPL17 GNL2 LARP1 RRP15 EBNA1BP2 IMP3 PUM3 NKRF PWP1 GTPBP4 NOP53 EEF2 UTP3 GLYR1 | 3 | 2 |
| 0.5 Ecsit complex (ECSIT, NDUFS3, NDUFAF1) | NDUFAF1 ECSIT ACAD9 | 3 | 1 |
| 0.2 GM130-GRASP65 complex | GOLGA2 TMED10 TMED1 GORASP1 TMED9 TNK1 TMED3 TMED4 TMED5 USO1 TICAM2 TMED2 | 3 | 2 |
| 0.05 SNARE complex (VAMP2, SNAP25, STX1a, CPLX1) | SYN2 DCLK1 SYN1 HIST1H2BL CAMK2B CAMK2A L1CAM CALB2 CNTN1 RAB7A NUFIP1 VSNL1 DNM1L DPYSL5 STX1A SNAP91 PPP3R1 DPYSL2 CAMKV DPYSL3 HPCA CDH13 SNAP25 RAB6B MAPT GNAO1 NCALD AMPH GNG2 GRIA2 RAB14 ATP4A GPM6B SYP NDRG4 NAPB DCX STXBP1 RAB3A CRMP1 STX1B SYT1 SNCB ANK2 DPYSL4 DGUOK | 2 | 1 |
| 0.3 Nup 107-160 subcomplex | SEH1L NUP160 NUP205 RGPD8 NXF1 TMEM214 NUP133 NUP85 NUP155 NUP35 NUP153 NUP107 NDC1 AAAS NUP98 NUP43 SUMO1 GLE1 NUP37 RANBP2 NUP210 NUP93 | 2 | 2 |
| 0.5 Gamma-tubulin complex | TUBG1 MZT1 MZT2A NME7 TUBGCP5 TUBGCP2 TUBGCP4 TUBGCP6 NEDD1 MZT2B TUBGCP3 | 2 | 1 |
| 0.6 DDB2 complex | BTBD1 COPS3 COPS8 DDB2 DCAF11 LRR1 COPS7A COPS4 DDA1 CUL2 DCAF4 COPS6 RBX1 CUL4B COPS5 CUL4A COPS7B COPS2 GPS1 | 2 | 1 |
| 0.1 SF3b complex | NSA2 CCDC86 DDX21 NOP16 SF3B4 MYBBP1A CHERP NKRF NIP7 GZF1 ZNF771 BRIX1 NOP53 ZCRB1 RPS5 LYAR SF3B2 STAU1 ZNF22 | 2 | 2 |
| GAA1-GPI8-PIGT-PIG-PIGS complex | PIGK PIGT GPAA1 PIGS PIGU | 2 | 1 |
| 0.3 AUP1-OS9-SEL1L-UBC6e-UBXD8 complex | OS9 ERLEC1 SEL1L | 2 | 1 |
| 0.1 RalBP1-CCNB1-AP2A-NUMB-EPN1 complex | EPS15 AP2B1 PIK3C2A AP2S1 AP2M1 NUMB AP2A1 RALBP1 DAB2 MYO6 AAK1 STAMBP REXO1 FCHO2 BMP2K AP2A2 STON2 CLTCL1 REPS1 | 2 | 1 |
| 0.7 TIM (TIM9, TIM10) complex, mitochondrial | TIMM8A TIMM10 TIMM9 | 2 | 1 |
| MIPOL1 NINL LRRC39 | NINL LRRC39 MIPOL1 | 2 | 1 |
| 0.7 GM130-GRASP65 complex | GOLGA2 GORASP1 TICAM2 | 2 | 1 |
| 0.1 BRD4-P-TEFb complex | FAM90A5P FAM90A1 BRD2 MTMR14 BRD3 KDM5B BRD4 | 2 | 1 |
| RWDD1 SRP19 SRP54 | SRP54 SRP19 RWDD1 | 2 | 1 |
| SLC30A5 SLC30A6 SLC30A7 | SLC30A7 SLC30A5 SLC30A6 | 2 | 2 |
| 0.3 ADIPOQ-PLOD3-GLT25D1 complex | PLOD2 ILKAP COLGALT2 PLOD3 COLGALT1 | 2 | 2 |
| 0.8 Cullin-RING E3 ubiquitin ligase complex | ELOC CUL5 ASB9 ELOB OGDHL | 2 | 1 |
| 0.2 REEP5-SPG33 complex | ATP1B3 REEP6 SCAMP4 REEP5 | 2 | 1 |
| 0.1 RAB5-EEA1 complex | RAB5A RILP CHM RAB5B RAB5C RAB7A | 2 | 1 |
| 0.4 Casein kinase II (beta-dimer, alpha, alpha') | PAF1 DOK4 SUPT4H1 LEO1 CSNK2A1 CSNK2A2 CSNK2B | 2 | 1 |
| 0.5 EIF2B1-EIF2B2-EIF2B3-EIF2B4-EIF2B5 complex | SCMH1 EIF2B2 EIF2B3 EIF2B4 SAAL1 EIF2B1 EIF2B5 HEATR3 ZSWIM6 TNPO1 | 2 | 2 |
| 0.4 Retromer complex (SNX1, SNX2, VPS35, VPS29, VPS26A) | VPS26A WASHC2A WASHC4 VPS35 SNX2 SNX5 WASHC5 VPS29 WASHC2C VPS26B ANKRD27 SNX1 FKBP15 TBC1D5 | 2 | 1 |
| 0.1 v-ATPase-Ragulator-AXIN/LKB1-AMPK complex match 2 | ATP6V1G1 ATP6V1C2 STOM TPPP3 IGBP1 ATP6V1H ATP6V1B2 ATP6V1A ATP6V1F ATP6V1D ATP6V1E1 | 2 | 1 |
| 0.1 TNF-alpha/NF-kappa B signaling complex (SEC16A, CHUK, IKBKB, NFKB2, REL, IKBKG, MAP3K14, RELA, FBXW7, USP2) | SEC16A BLZF1 FAM83H USO1 PKP2 SLC30A6 | 2 | 2 |
| 0.3 Casein kinase II (beta-dimer, alpha, alpha') | GPATCH2 VSX1 RNF111 CSNK2A1 PHRF1 FBRSL1 CSNK2A2 HIRIP3 CSNK2B | 2 | 1 |
| 0.2 SIGMAR1-KCNH2 complex | SIGMAR1 SC5D ALG8 GPR89A VKORC1L1 | 2 | 2 |
| 0.1 AMFR-ERLIN2-TMUB1 complex | DNAJC11 FAM8A1 ATAD1 KIDINS220 ACBD5 TMUB1 RMDN3 | 2 | 2 |
| 0.1 WICH complex | RIOX1 HIST2H3C HNRNPU H1FX MRM3 SPATS2 MEPCE SRP72 DHX33 BAZ1B PRRC2C RPL29 RPL10 | 2 | 1 |
| 0.2 GNAI1-GNB1-GNG4 complex | GNAI1 RGS12 RGS14 GNB1 GNG11 GNB4 GNG10 RIC8A GNG4 GNG7 GNAI3 GNAI2 GNG5 | 2 | 1 |
| 0.1 Nogo-potassium channel complex match 2 | GOLT1B ATP1B2 RTN4 FAM8A1 SH3PXD2A ARL6IP1 RABAC1 | 2 | 1 |
| 0.3 Respiratory chain complex I (lambda subunit) mitochondrial | UQCRC1 STOML2 TMUB1 NDUFV2 NDUFS6 NDUFB4 TMEM43 NDUFS3 TMEM199 NDUFB7 NDUFS1 FAM8A1 ATAD1 NDUFA2 GOLT1B NDUFA8 NDUFA7 NDUFA12 NDUFV1 | 2 | 2 |
| 0.6 Ribosome, cytoplasmic | WDR89 RPS15A RPL15 RPLP0 RPL21 RPL10A RPS17 RPS11 RPS21 RPS15 RPL19 RPS20 RPS19 RPS27 HIST1H1B RPL18A RPS25 RPL5 RPSA RPS23 RPL35 RPL34 HNRNPU RPS27L RPS13 RPS3 RPL9 RPS2 RPL36 RPL8 RPS6 RPL36A-HNRNPH2 RPL10 RPL35A RPLP2 NAT10 RPL13 RRBP1 RPL14 RPL24 RPL23A RPS3A RPS14 RPL37A RPL27A EIF3B RPL22 RPL27 RPL7A EIF2S1 RPL31 FBL RPS8 RPS18 RPL6 BYSL RPL7 RPL12 TSR1 RPL23 NPM1 DHX37 RPL3 RPL32 RPS10 RPS5 RPS9 RPS16 RPL18 YBX3 RPL11 RPS4X RPS7 | 1 | 1 |
| 0.3 Ribosome, cytoplasmic | RPL17-C18orf32 RPL21 RPS19 RPS25 RPL4 RPS13 YBX1 RPS2 RPL36 RPL8 RPS6 RPL10 RPLP2 RPL13 RPL37A RPS14 NAP1L4 RPS12 RPL27 RPL7A RPL31 RPS18 RPL6 RPL7 RPL30 RPL23 RPL3 RPS9 RPL27A CCDC124 | 1 | 1 |
| 0.1 Spliceosome | LUC7L2 SRSF6 SRSF3 SRSF5 TRA2A SRSF4 CWC22 PRPF4B SRSF1 PPIG ZC3H18 SRSF2 LUC7L THRAP3 SRRM1 SRSF9 TRA2B SREK1 PUF60 DDX46 SRSF7 SRSF11 SRSF10 BCLAF1 U2AF2 RBM39 PNN U2AF1L5 LUC7L3 SNRNP70 ACIN1 SRRM2 RNPS1 | 1 | 1 |
| 0.8 PA700 complex | PSMC4 PSMB8 PSMD7 PSMD6 PSMD1 PSMC1 PSMD13 PAAF1 ADRM1 PSMC6 PSMD3 PSMD4 UCHL5 PSMD2 PSMD14 PSMC2 UBE3A PSMD10 PSMC5 PSMD5 PSMD12 PSMD8 PSMD11 PSMC3 | 1 | 1 |
| 0.4 MeCP1 complex | MTA2 ZBTB2 CHD5 CDK2AP1 ZNF521 RBBP7 GATAD2B ZNF219 MBD2 HDAC2 GATAD2A ZNF423 CHD3 BCL11A MTA1 RBBP4 CHD4 MTA3 MBD3 | 1 | 1 |
| 0.1 CART complex | AKAP2 CALML3 FLII CFL1 ACTG1 CORO1C PLEKHG3 MYO5A COBL ACTN4 TES TMOD1 SPTBN1 ABLIM1 SPECC1 SSH2 CORO1B BASP1 WDR1 AFAP1 MYO19 MYO5C TWF1 NEXN ZDHHC5 MYO1E RAI14 ST5 MYO5B SORBS2 ARPC4 | 1 | 1 |
| 0.9 CORVET complex | VPS18 TGFBRAP1 VPS41 VPS11 VPS8 VPS33A VPS16 | 1 | 1 |
| EMC10 EMC9 EMC8 EMC4 EMC1 EMC6 EMC2 EMC7 EMC3 MMGT1 | EMC7 EMC6 EMC10 EMC9 EMC4 MMGT1 EMC1 EMC2 EMC3 EMC8 | 1 | 1 |
| 0.1 60S ribosomal subunit, cytoplasmic match 2 | EEF1A1 CARS RPS15A RPL21 RPL19 RPL18A EEF1G MKKS RPL4 EEF1B2 RPL36 RPL10 VARS RPL13 RPS8 RPS18 EEF1A2 EEF1D RPL18 | 1 | 1 |
| 0.5 F1F0-ATP synthase, mitochondrial | ATP5PB ATP5PO ATP5MG PHB ATP5F1B ATP5PF ATP5F1E ATP5F1D SLC25A4 SLC25A5 ATP5PD ATP5ME HADHB ATP5F1C ATP5MF CANX ATP2A2 SLC25A3 ATP5F1A | 1 | 1 |
| 0.7 eIF3 complex (EIF3S6, EIF3S5, EIF3S4, EIF3S3, EIF3S6IP, EIF3S2, EIF3S9, EIF3S12, EIF3S10, EIF3S8, EIF3S1, EIF3S7, PCID1) | RPLP0 EIF3G EIF3D JOSD1 PRRC2B EIF3E EIF3L EIF3I EIF3A EIF3H EIF3CL EIF3B RPL7A EIF2S1 EIF3K EIF3F EIF3C EIF3M EIF3J | 1 | 1 |
| 0.1 Ribosome, cytoplasmic | SND1 RACK1 C19orf53 RPS15 RPL29 SRBD1 RPS25 RPL38 HNRNPU SPATS2 RPL10 G3BP1 RPL12 NPM1 RPS16 THAP11 BAZ1B RPL27A RPS4X | 1 | 1 |
| EAPP TSSC4 SLC7A6OS AAR2 ZNHIT2 ECD NCDN | ECD EAPP NCDN TSSC4 ZNHIT2 SLC7A6OS AAR2 | 1 | 1 |
| 0.7 Methionine adenosyltransferase alpha2 beta-v1 | MAT2B MAT1A MAT2A | 1 | 1 |
| 0.2 TIMM8A-TIMM13 complex | TIMM8B TIMM13 PDYN | 1 | 1 |
| C8orf82 ETFRF1 ETFA | C8orf82 ETFA ETFRF1 | 1 | 1 |
| 0.2 ELN-FBLN2-FBN1 complex | FBN1 GGNBP2 ZFP41 LTBP1 | 1 | 1 |
| 0.1 GAIT complex | RPL13A FAU COX5B RPS12 RPL36 | 1 | 1 |
| 0.2 GRASP1-GRIP1 complex | GRIPAP1 TCP10L2 TCP10 | 1 | 1 |
| AMPD2 TRMT1 METTL1 | TRMT1 METTL1 AMPD2 | 1 | 1 |
| GOLGA3 HIP1 DEUP1 MAFG | MAFG HIP1 DEUP1 GOLGA3 | 1 | 1 |
| GOLGA7 CLDND1 MAN1A2 ZDHHC8 | MAN1A2 ZDHHC8 GOLGA7 CLDND1 | 1 | 1 |
| BRD2 PWWP2B FARP1 | FARP1 BRD2 PWWP2B | 1 | 1 |
| 0.2 Intraflagellar transport complex B peripheral subcomplex | EHBP1 IFT57 HSBP1 TRAF3IP1 | 1 | 1 |
| 0.7 TBX20-TLE1 repressor complex | TLE1 TLE4 TBX20 | 1 | 1 |
| 0.7 PLEKHA7-PDZD11 complex | PLEKHA7 TSPAN33 PDZD11 | 1 | 1 |
| RAB8B RAB1A GDI2 | RAB8B GDI2 RAB1A | 1 | 1 |
| 0.2 erlin1/2-RNF170 complex | ERLIN2 RIC3 TAPT1 | 1 | 1 |
| 0.6 AP3 adaptor complex | RNF13 AP3M2 JMJD6 AP3M1 AP3S1 AP3B1 AP3D1 | 1 | 1 |
| 0.2 BCR-ABL (p185 fusion protein)-GRB2 complex | RAP1GDS1 GRB2 OSBPL2 | 1 | 1 |
| SASS6 FYCO1 MLYCD | FYCO1 SASS6 MLYCD | 1 | 1 |
| YIF1A YIF1B YIPF5 | YIPF5 YIF1B YIF1A | 1 | 1 |
| 0.2 Nogo-potassium channel complex | RTN4 FAM241A SH3PXD2A | 1 | 1 |
| 0.2 BETA2-Cyclin D1 complex | TCF3 TCF12 ID1 NEUROD1 TCF4 | 1 | 1 |
| 0.3 DNA synthesome complex (15 subunits) | POLE POLA1 POLE4 POLE2 POLE3 | 1 | 1 |
| SSX2IP ZBTB44 ASNSP6 WRAP73 CEP135 | CEP135 ZBTB44 ASNSP6 WRAP73 SSX2IP | 1 | 1 |
| 0.2 FIF-FGR2 complex | DHRS2 BCS1L FGF2 TMEFF1 | 1 | 1 |
| 0.1 NUMB-TP53-MDM2 complex | NUMB REXO1 PJA2 KIF13A AP2M1 | 1 | 1 |
| 0.3 RFC complex | RFC5 USP10 RPL29 RIOX1 RPS25 RFC1 HNRNPU H1FX TRMT1L RPL10 RFC3 RRBP1 MEPCE RFC2 RPL32 DHX33 NPM1 RPS4X RFC4 | 1 | 1 |
| 0.2 LAP1-TOR1A complex | CHCHD4 TOR1AIP1 MREG | 1 | 1 |
| 0.6 FHF complex | HOOK3 NAB1 AKTIP FAM160A2 FAM160A1 HOOK1 | 1 | 1 |
| COLEC10 PTX3 INHBE | PTX3 INHBE COLEC10 | 1 | 1 |
| 0.1 Casein kinase II (beta-dimer, alpha'-dimer) | GPATCH2 GPATCH2L HAGHL PHRF1 NKAP CSNK2A2 | 1 | 1 |
| 0.4 CCT complex (chaperonin containing TCP1 complex) | PDCL CCT4 TXNDC9 CCT5 TUBA3E CCT3 UBA3 CCT7 DNAJC19 MLST8 PDCD5 TCP1 CCT6A CCT8 TCEA1 HGH1 CCT2 CCT6B PDCL3 | 1 | 1 |
| 0.2 HK1-VDAC1 complex | HK1 ASPDH RAB8A | 1 | 1 |
| SEC24A SLC25A29 TRMT1 | SEC24A TRMT1 SLC25A29 | 1 | 1 |
| 0.2 Endosomal targeting complex (VIPAS39-VPS33B) | VPS33B FKBP15 ITPR3 ITPRID2 | 1 | 1 |
| 0.2 ITGAV-ITGB5 complex | MFGE8 ITGB5 FAM3A | 1 | 1 |
| 0.2 Apoptosome match 2 | GSTK1 CYCS CYB5B | 1 | 1 |
| HELZ USP54 PUM1 | PUM1 HELZ USP54 | 1 | 1 |
| 0.4 LSm2-8 complex | LSM7 LSM5 LSM8 SLU7 LSM4 SPTB | 1 | 1 |
| 0.1 v-ATPase-Ragulator-AXIN/LKB1-AMPK complex | CCDC115 ATP6AP1 VMA21 ATP6AP2 ATP6V0C ATP6V0A1 | 1 | 1 |
| 0.1 GSKIP-PRKAR2B complex | AKAP7 TSSK1B PRKAR2B CRYBG3 PRKX AKAP13 | 1 | 1 |
| 0.4 MAD1L1-MAD2L1 complex | MAD2L1BP BAG5 MAD2L1 MAD1L1 EPM2AIP1 | 1 | 1 |
| 0.5 Integrator complex | INTS4 INTS6 INTS11 INTS12 INTS9 INTS4P2 INTS5 | 1 | 1 |
| 0.1 FACT-NEK9 complex | EML4 EML2 NEK9 EML1 EML3 | 1 | 1 |
| FBXO45 LGALS3BP MYCBP2 SPRYD3 | FBXO45 SPRYD3 LGALS3BP MYCBP2 | 1 | 1 |
| 0.2 TorsinA-TorsinB complex | ZNF273 ZNF707 TOR1A ZNF747 TOR2A | 1 | 1 |
| 0.1 C-CFTR-NHERF-ezrin complex | MSN PLS1 EIF5AL1 LCP1 TPT1 EZR RDX TAF15 | 1 | 1 |
| 0.2 ESCRT-III complex | CHMP3 CHMP2A TM9SF1 CHMP1A TFG | 1 | 1 |
| 0.1 tRNA Splicing Ligase Complex | FARSB AASS FAM98B DIS3 ARPC5 | 1 | 1 |
| 0.2 ADRA1A-CXCR4 complex match 2 | CERS2 KCNK1 GOLGA5 CXCR4 ABCC1 | 1 | 1 |
| GPAT3 CHP1 GPAT4 GGCX FADS2 | GGCX FADS2 GPAT4 CHP1 GPAT3 | 1 | 1 |
| SAMHD1 SOGA1 RNF41 MTCL1 CLEC16A | SAMHD1 MTCL1 RNF41 SOGA1 CLEC16A | 1 | 1 |
| 0.5 BHC complex | MTA2 HMG20B RCOR2 PHF21A HDAC2 KDM1A GSE1 RCOR3 HDAC1 HMG20A RCOR1 | 1 | 1 |
| 0.1 BBS4 centriolar satellite complex | KIAA0753 CEP350 CEP19 PPP2R3C FGFR1OP CSPP1 CCDC77 CEP131 TBC1D31 | 1 | 1 |
| 0.1 CTCF-nucleophosmin complex | SCAF1 RACK1 MKI67 HIST1H2BD LARP4B NPM1 | 1 | 1 |
| 0.5 Intraflagellar transport complex B peripheral subcomplex | IFT20 IFT57 IFT88 CLUAP1 IFT172 EHBP1 TRAF3IP1 HSBP1 TTC30B RABEP2 IFT80 | 1 | 1 |
| 0.1 SEC23-SEC24 adaptor complex | SEC16A CSNK1A1 BTBD3 OCRL CRTC2 FAM83H SEC24B FAM83A TNK2 USO1 PKP3 PKP2 | 1 | 1 |
| 0.2 p21(ras)GAP-Fyn-Lyn-Yes complex, thrombin stimulated | CXADR GNB1 LYN SRC RRAS2 PALM YES1 GNA11 CCNY GNA13 | 1 | 1 |
| 0.4 tRNA Splicing Ligase Complex | PSPC1 FAM98B EWSR1 DDX1 RTRAF HNRNPM HNRNPH3 EIF4H RTCB | 1 | 1 |
| ANKRD9 DDX53 IMPDH2 SLC25A44 IMPDH1 | SLC25A44 IMPDH1 IMPDH2 DDX53 ANKRD9 | 1 | 1 |
| 0.3 ITGA5-ITGB4 complex | ITGA3 ITGA5 ITGB1 ITGA6 SLC3A2 ITGA7 | 1 | 1 |
| 0.1 Kinase maturation complex 1 | CHCHD1 CDK15 MARK2 NAP1L5 RNF138 | 1 | 1 |
| THOP1 IDE CASP3 SERPINB8 | THOP1 IDE CASP3 SERPINB8 | 1 | 1 |
| 0.1 ITGAV-ITGB8-MMP14-TGFB1 complex | PLEKHA5 INHBA CALCB ITGB8 RCHY1 GINM1 | 1 | 1 |
| ADSL BPNT1 ETFA QDPR FABP5 HIBCH SOD2 ETFB CBS CAT CLYBL | ETFB BPNT1 SOD2 CBS CAT ADSL FABP5 CLYBL HIBCH ETFA QDPR | 1 | 1 |
| 0.1 SMN complex (GEMIN5,4,3), SMN-independent intermediate | IPO11 CIP2A GEMIN4 TNPO2 KIF14 THADA ZW10 SAAL1 XPO4 TNPO3 DDX20 TNPO1 BTAF1 XPO7 FANCD2 | 1 | 1 |
| 0.1 DLGAP1-DLG4-DYNLL2 complex match 2 | GSR RBM38 DYNLL2 PPIL3 HSD17B14 FUBP3 FUBP1 | 1 | 1 |
| 0.1 ITGA1-ITGB1-COL6A3 complex match 2 | ANO6 CLCN5 LGALS8 ITGA1 ABCC4 CLCN3 | 1 | 1 |
| PDE4DIP CLASP2 CLASP1 KIF18B MAPRE1 | CLASP2 CLASP1 MAPRE1 PDE4DIP KIF18B | 1 | 1 |
| 0.5 Prefoldin complex | LMNB2 PDRG1 PFDN1 AOX1 PFDN5 PFDN2 VBP1 PFDN6 FBN2 PFDN4 PAPSS2 | 1 | 1 |
| GPD1L MDN1 PCBD1 COQ5 | PCBD1 MDN1 GPD1L COQ5 | 1 | 1 |
| 0.2 DSIF complex (DRB sensitivity-inducing factor complex) | POLR2E POLR2B SUPT4H1 SUPT5H RBM46 POLR2G NCL GTF2F2 | 1 | 1 |
| 0.1 PlexinA1-NRP1 complex | CNTNAP3 PLXNA3 ARSK PLXNA1 ENTPD6 PTPRU MBTPS1 MEGF8 CHST10 ADAM9 GALNT13 CACNA2D2 | 1 | 1 |
| 0.1 AATF-NGDN-NOL10 complex | WDR36 WDR3 NOC2L TBL3 NSUN5 NOB1 BCCIP PWP2 AATF | 1 | 1 |
| 0.5 MCM complex | MCMBP MCM5 MCM6 MCM10 DNMT1 EIF2S2 MCM3 MCM2 MCM4 CCDC88C FNBP1L MCM7 SUB1 | 1 | 1 |
| 0.1 AMFR-ERLIN2-TMUB1 complex match 2 | GOLT1B MBOAT7 SOAT1 FAM8A1 TMUB1 NDUFS6 | 1 | 1 |
| ADSL CRYZ GPT2 OXCT1 ETFA FH ETFB LDHAL6A DBI | DBI ETFB FH ADSL OXCT1 LDHAL6A CRYZ GPT2 ETFA | 1 | 1 |
| LRRFIP2 UBXN6 VCPKMT POR UBXN2A TMOD3 | UBXN2A UBXN6 LRRFIP2 POR VCPKMT TMOD3 | 1 | 1 |
| 0.2 ARD1-NATH complex | PNISR NAA15 TOP3A RAP1GDS1 NAA10 | 1 | 1 |
| 0.5 C-CFTR-NHERF-ezrin complex | SLC9A3R1 EZR HMGN5 | 1 | 1 |
| SNX12 RAB10 RBM12 | SNX12 RAB10 RBM12 | 1 | 1 |
| 0.3 ESCRT-III complex | CHMP2A CHMP2B CHMP4B | 1 | 1 |
| 0.2 PDGFRA-SHP-2 complex, PDGF stimulated | RAB5C PTPN11 RAB5B | 1 | 1 |
| MPST AKR1A1 ETFA | ETFA MPST AKR1A1 | 1 | 1 |
| NGLY1 RAD23A SPTBN2 | RAD23A NGLY1 SPTBN2 | 1 | 1 |
| 0.3 BANF1 homodimer protein | ATE1 BANF1 PARP1 | 1 | 1 |
| 0.1 Apoptosis- and splicing-associated protein complex (ASAP-L), SAP18, RNPS1, Acinus-L | LUC7L2 CLASRP SNIP1 SNRNP27 RNPS1 GPATCH8 | 1 | 1 |
| 0.05 C complex spliceosome match 2 | CLVS2 DDX41 PITRM1 | 1 | 1 |
| 0.1 SH3P2/OSTF1-CBL-SRC complex | PEX19 FAM174A SLC44A2 RP2 OSTF1 MARC2 | 1 | 1 |
| 0.1 F1F0-ATP synthase, mitochondrial | PDHA1 ATP5F1B PDHX PDHB ATP5MG STAT5A DLAT ATP5F1A STAT5B | 1 | 1 |
| 0.2 Large Drosha complex | RBM8A DDX17 DDX3X HNRNPK EIF4A3 DHX15 HNRNPUL1 RDX TAF15 | 1 | 1 |
| 0.1 RFC complex | NOP56 GTPBP4 RIOX1 MKI67 RFC1 NOC2L UHRF1 URB2 SRP72 DHX33 RPL10 | 1 | 1 |
| 0.1 PlexinA3-Nrp1 complex | ADAM17 LRIG1 TTC13 PLXNA3 ENTPD6 GALNT7 CHPF | 1 | 1 |