Protein-wise complex membership list can be viewed here.
All predicted complexes are listed below with their corresponding proteins. Only SARS-COV2 interacting protein complexes from the predictions can be found here.
Complex Protein membership in complex No. of proteins interacting with SARS-COV2 No. of interacting SARS-COV2 proteins
0.2 PKA (RII-alpha and RII-beta)-AKAP5-ADRB1 complex AKAP1 AKAP11 AKAP14 PRKAR2A AKAP5 PRKACB LOC100134230 PRKAR1A PRKACG PRKACA PRKAR2B AKAP7 AKAP9 PRKAR1B AKAP13 PRKX DKFZp686M1993 41
0.7 Exosome C1D EXOSC6 EXOSC5 PNAS-3 EXOSC1 EXOSC4 EXOSC10 EXOSC9 EXOSC2 EXOSC7 EXOSC8 MPHOSPH6 31
0.1 Isocitrate dehydrogenase [NADP], mitochondrial CNN3 CAPRIN1 HNRPA1 SNRPA G3BP2 ALYREF USP10 ATXN2L IDH2 DKFZp686L1159 FAHD1 PABPC1 HNRNPK HDAC2 KHDRBS1 NUFIP2 ADK 32
0.1 NPC subcomplex (NUP98, NUP107, NUP133, NUP160) NUP88 NUP214 hCG_19665 NUP98 32
0.5 Ecsit complex (ECSIT, NDUFS3, NDUFAF1) NDUFAF1 ECSIT ACAD9 31
0.8 DNA polymerase alpha-primase complex PRIM1 POLA1 POLA2 31
0.3 28S ribosomal subunit, mitochondrial MRPS11 MRPS9 DAP3 MRPS31 MRPS23 PTCD3 MRPS35 MRPS18B MRPS34 MRPS5 MRPS22 MRPS27 21
0.6 Gamma-tubulin complex TUBG1 MZT2B TUBGCP6 NME7 TUBGCP4 MZT1 TUBGCP3 MZT2A TUBGCP5 TUBGCP2 21
0.1 KIAA0753-FOR20-OFD1 complex PIBF1 CSPP1 CCDC14 CEP131 SSX2IP MIB1 CEP72 CEP43 TBC1D31 CCDC77 CCDC138 KIAA0753 OFD1 GAN 22
0.1 Stargazin-AP-2-AP-3a complex CLINT1 AP2M1 AP2B1 AP2A2 NECAP2 AP2S1 AP2A1 CLTB 21
0.2 PLOD2-FKBP10 complex PLOD1 COLGALT1 PLOD2 DKFZp564O1822 HNRNPH2 22
0.2 TLE1-TLE2 complex TLE3 TLE2 PP2150 TLE4 SEPTIN7 TBX20 RIPPLY2 TLE1 21
0.8 GAA1-GPI8-PIGT-PIG-PIGS complex PIGK PIGT GPAA1 PIGS 21
0.2 PABPC1-HSPA8-HNRPD-EIF4G1 complex RPS5 MAPRE2 IVD SRSF6 BCAT1 PABPC1 HNRNPK PABPC4 EIF4G1 SNRPD2 21
0.2 ABCB1-PPP2R3C-TFPI2 complex CEP350 CEP43 PPP2R3C 21
0.2 HSPA9-GRPEL1 complex GRPEL1 HEL-S-70 HEL-S-89n CLTB HEL-S-125m PABPC1 ALDOC CLTA HEL-S-72p HSPA9 CLTC 22
0.3 Cullin-RING E3 ubiquitin ligase complex PFKM SGTA VHL ASB9 ELOB TCEB1 ATP6V1A CUL5 22
0.5 GM130-GRASP65 complex GOLGA2 STX12 GORASP1 CCNJ 21
0.1 BRD4-P-TEFb complex FAM90A26 FAM90A5P BRD2 BRD3 FAM90A1 BRD4 21
0.2 SCAMP1-SCAMP2 complex REEP6 SCAMP2 REEP5 21
0.1 ATL3-SPG31 complex TMEM208 RTN1 CYB5R3 RTN4 ATL3 ATP1B2 DERL2 RTN2 RABAC1 22
0.2 TNF-alpha/NF-kappa B signaling complex 6 RPLP0 RRP9 RPL37A RPL6 RPL23 NOP58 RPL30 FBL RPL9 hCG_1994130 RPL5 RPS13 NOP56 RPL7 11
0.5 MeCP1 complex CHD4 RBBP7 HDAC1 MTA2 MBD3 RBBP4 MTA1 ZNF521 SIN3B MBD2 GATAD2A MTA3 HDAC2 ZNF219 GATAD2B CHD5 CHD3 11
0.5 eIF3 complex (EIF3S6, EIF3S5, EIF3S4, EIF3S3, EIF3S6IP, EIF3S2, EIF3S9, EIF3S12, EIF3S10, EIF3S8, EIF3S1, EIF3S7, PCID1) EIF3C EIF3A EIF3F EIF3K EIF3S9 EIF3M EIF3S3 EIF3G PRRC2B EIF3D NPM3 EIF3S8 EIF3S2 EIF3E EIF3L 11
COX4NB EMC7 EMC9 EMC10 MMGT1 EMC3 EMC1 EMC6 TMEM85 EMC2 COX4NB MMGT1 EMC9 EMC10 EMC7 EMC1 EMC6 EMC2 EMC3 TMEM85 11
Nup 107-160 subcomplex NUP107 NUP43 NUP85 SEH1L NUP160 NUP133 SEC13 NUP37 NUP98 11
0.1 v-ATPase-Ragulator-AXIN/LKB1-AMPK complex ATP6V1B2 ATP6V1E1 ATP6V1G1 ATP6V1F ATP6V1B1 ATP6V0D1 ATP6V1A ATP6V1C2 ATP6V1D 11
0.6 Respiratory chain complex I (lambda subunit) mitochondrial NDUFA7 NDUFB5 NDUFA6 NDUFS7 NDUFA12 NDUFV2 NDUFB9 NDUFS2 NDUFB11 NDUFA2 NDUFS6 NDUFA5 MT-ND1 NDUFV1 NDUFS4 NDUFB8 NDUFS1 NDUFS8 NDUFS3 11
0.3 TFIIE complex SUPT5H GTF2F1 GTF2E2 GTF2E1 SIN3A GTF2F2 11
0.6 BHC complex SFMBT1 RCOR2 HDAC1 HMG20B KDM1A GSE1 HMG20A RCOR1 HDAC2 PHF21A 11
0.8 Paf complex PAF1 WDR61 CTR9 LEO1 CDC73 BRD4 11
0.1 Gamma-secretase complex (APH1A, PSENEN, PSEN1, NCSTN, TMP21) TMED1 TMED3 TMED10 RNP24 TMED5 TMED4 TMED9 11
0.9 AP3 adaptor complex AP3B1 AP3S1 AP3M1 AP3B2 AP3M2 AP3D1 11
0.4 WASH complex WASHC2A WASHC4 WASH6P CAPZA2 WASHC3 WASHC2C WASHC5 WASH3P 11
0.1 C-CFTR-NHERF-ezrin complex ACAA2 HEL70 CACYBP EZR RDX 11
0.8 CORVET complex VPS8 VPS11 VPS18 VPS16 TECPR2 VPS33A TGFBRAP1 VPS41 11
0.3 tRNA Splicing Ligase Complex PSPC1 HNRNPM TPR SFPQ DDX1 RTCB FAM98B FAM98A C14orf166 11
0.2 RalBP1-CDC2-CCNB1 complex AP2M1 sp|Q6ZSR9|YJ005_HUMAN REPS1 RALBP1 11
0.1 BETA2-Cyclin D1 complex FERD3L MYF6 MYOG NEUROG3 TWIST2 ID1 NEUROD1 TCF12 TCF4 ID2 11
0.2 FHF complex KIAA0427 HOOK1 FTS HOOK3 FHIP1B FHIP1A 11
TSSC4 ECD AAR2 AAR2 ECD TSSC4 11
IMPDH ANKRD9 IMPDH2 IMPDH2 IMPDH ANKRD9 11
0.1 GRASP1-GRIP1 complex CRYZL1 C12orf4 GRIPAP1 GATD1 IL6R TBCK TCP10L PPP1R21 11
DYRK1B LZTS2 DYRK1A DKFZp686H01244 DCAF7 FAM53C CEFIP DCAF7 DYRK1A DKFZp686H01244 LZTS2 CEFIP FAM53C DYRK1B 11
0.1 SMG-1-UPF-ERF1-ERF3 complex (SURF) SMG1 FLJ12886 EPHA1 ZC3H7A DKFZp547C195 11
CTDSPL CTDSP2 MAP7D1 CDCA3 CTDSP1 CTDSP1 MAP7D1 CTDSPL CDCA3 CTDSP2 11
0.2 TIMM8A-TIMM13 complex PPIB TIMM8B TIMM13 PDYN 11
HEL-S-72p C1orf119 BZW2 Nbla10236 C1orf119 HEL-S-72p BZW2 Nbla10236 11
0.5 Methionine adenosyltransferase alpha2 beta-v1 MAT2A MAT1A MAT2B HNRNPM 11
GDI1 RAB8B RAB1A AKR1C2 RAB33B LDHC RAB1B ACOX1 ACOX1 GDI1 AKR1C2 RAB8B RAB1B RAB1A RAB33B LDHC 11
0.2 SEPHS1-SEPHS2-SEPSECS-SECp43 complex ABLIM1 SEPSECS CPPED1 11
NIN CEP170P1 CEP170 NIN CEP170P1 CEP170 11
GCC1 JPH4 ARHGAP29 ARHGAP29 GCC1 JPH4 11
0.2 Kinase maturation complex 2 TBK1 TRAF2 TANK TRAF6 TRAF1 OTUD4 LTBR FBXO28 RUNDC2A 11
0.1 TNF-alpha/NF-kappa B signaling complex 10 TXLNA TXLNB ZNF207 TXLNG NOSIP CEP135 11
ZDHHC5 CLDND1 ZDHHC8 ZDHHC8 CLDND1 ZDHHC5 11
C22orf5 SNIP1 WSB2 WSB2 SNIP1 C22orf5 11
64599 tmp_locus_9 GIGYF2 GIGYF1 GIGYF2 tmp_locus_9 11
0.3 AUP1-OS9-SEL1L-UBC6e-UBXD8 complex OS9 SEL1L HEL117 11
0.2 PRAME-Cullin2 ubiquitin ligase complex KLHDC3 BRAP CUL2 11
0.2 SERCA-PLN complex ATP1B1 ATP1A1 ATP5PO ATP2A2 11
0.2 Nogo-potassium channel complex ATP1B3 RTN4 ARL6IP1 11
GINM1 RCHY1 PLEKHA5 PLEKHA5 RCHY1 GINM1 11
0.1 TNF-alpha/NF-kappa B signaling complex 8 SLC30A6 SLC30A5 KTN1 SPPL2B 11